Latest papers (VCF/Plotein!) and activities at the CG&Bio lab

It was snowing in Lake Geneva, WI, where the Forbeck Foundation meeting took place!

It was snowing in Lake Geneva, WI, where the Forbeck Foundation meeting took place!

The last two weeks have been intense for the CG&Bio lab… First, we have published our first preprint in bioRxiv! Click here to check it out! Also, the full code can be found here.

In this manuscript, we describe a new software tool we have developed, called VCF/Plotein, that allows any researcher with or without any bioinformatics expertise to visualise exome sequencing data in the VCF format and interact with this information, namely, identify mutated genes, filter them in various ways, see genetic variants and various information about them, and generate vector or pixel graphics for presentations or publications. Any comments or suggestions welcome! This is the result of lots of work by an amazing team: Raul and Diego with support from Isaac, Jair, Luis and advice from David Adams.

We have also recently published a commentary on a remarkable study of non-mutational mechanisms of drug resistance acquisition in melanoma cells. Check it out here!

Finally, we have been quite active, with Christian attending the Wellcome Genome Campus Course in Genomics for Dermatology in Hinxton, UK and Daniela giving talks at the International Congress of the Society for Melanoma Research in Manchester, UK and the Forbeck Foundation Annual Forum in Cancer Predisposition in Lake Geneva, WI, USA.

Christian at the Genomics for Dermatology course in Hinxton, UK!

Christian at the Genomics for Dermatology course in Hinxton, UK!

Daniela speaking at the International Congress of Society for Melanoma Research in Manchester, UK

Daniela speaking at the International Congress of Society for Melanoma Research in Manchester, UK


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